Bioinformatique

ALL-P is a statistical framework based on a hierarchical modeling that takes into account shared peptide information for estimating protein abundances.

BEADS is a program for spot detection on 2-D gel images. It is based on an analogy with beads flowing uphill on the surface of the gel image and on the analysis of their paths.

The classical method for protein identification of LC-MS/MS data uses database searching and matching, as it is the case in Mascot, Sequest or X!

This Java application, stores all your sequence databases in a single folder (repository). It offers : conservation of metadata : database origin, species, number of protein, download site, … translation of DNA into protein creation of decoy protein databases (protein reverse, random, peptide reverse combination of different existing databases This application can managed multiple repository.

description SpectrumFinder is a simple command line tool to compare a collection of reference spectrum to other spectrum from one or more mzXML files.