langella@milano:~/developpement/git/peptidoms/specpeptidoms/build$ time ./src/spoms -p ../doc/typst/json/spoms_parameters.json -f /gorgone/pappso/moulon/database/Genome_Z_mays_5a.fasta -m /gorgone/pappso/data_extraction_pappso/mzcbor/20120906_balliau_extract_1_A01_urnb-1.mzcbor -o 20120906_balliau_extract_1_A01_urnb-1.cbor -c 20
1 CPUs used
getting mz data file /gorgone/pappso/data_extraction_pappso/mzcbor/20120906_balliau_extract_1_A01_urnb-1.mzcbor
starting Spoms
loading protein list
spectrum id 132
starting process for spectrum index 132 (total done: 0)
starting process for spectrum index 504 (total done: 1)
starting process for spectrum index 623 (total done: 2)
starting process for spectrum index 1338 (total done: 3)
starting process for spectrum index 1481 (total done: 4)

Process for spectrum index 16574 finished. Slowest one is 15553
Process for spectrum index 16571 finished. Slowest one is 15553
Process for spectrum index 15553 finished. Slowest one is 16534
Process for spectrum index 16534 finished. Slowest one is 16570

real	33m19,149s
user	615m38,178s
sys	0m1,097s



langella@milano:~/developpement/git/peptidoms/specpeptidoms_java/tests$ time java -Xms16G -jar ../SpecPeptidOMS-1.0.0.jar --c --paramFile test_zea_big_fasta.ini
=====PROCESS STARTED IN COMMAND MODE=====
**********Parameter File: test_zea_big_fasta.ini
1000 spectra loaded
2000 spectra loaded
3000 spectra loaded
4000 spectra loaded
5000 spectra loaded
6000 spectra loaded
7000 spectra loaded
8000 spectra loaded
9000 spectra loaded
10000 spectra loaded
11000 spectra loaded
11742 spectra have been loaded.
136770 proteins have been loaded.
__
__
__
__
__
save...11742
** 34.4s
Job done in 2756.724 secondes.

real	45m56,786s
user	728m5,554s
sys	0m1,684s
