Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
494503 theoretical spectra added.
java.io.FileNotFoundException: ../01650b_BG3-TUM_first_pool_65_01_01-DDA-1h-R2.mgf (No such file or directory)
0 experimental spectra added.
Clustering 494503 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]Done.


Dataset analyzed in 600 seconds.
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
494503 theoretical spectra added.
1 experimental spectra added.
Clustering 494504 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]Done.


Dataset analyzed in 247 seconds.
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
494503 theoretical spectra added.
java.io.FileNotFoundException: ../b1906_293T_proteinID_02A_QE3_122212.mgf (No such file or directory)
0 experimental spectra added.
Clustering 494503 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]Done.


Dataset analyzed in 308 seconds.
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
494503 theoretical spectra added.
43137 experimental spectra added.
Clustering 537640 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]**********]
Done.


Dataset analyzed in 1062 seconds.
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
494503 theoretical spectra added.
43137 experimental spectra added.
Clustering 537640 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]**********]
Done.


Dataset analyzed in 3144 seconds.
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:494503
Constructing theoretical spectra...
494503 theoretical spectra added.
43137 experimental spectra added.
Clustering 537640 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]**********]
Done.


Dataset analyzed in 2850 seconds.
Reading configuration
Parsing proteins...
48359 database proteins added...
Adding contaminants...
128 contaminants proteins added...
Nombre de peptides:988082
Constructing theoretical spectra...
988082 theoretical spectra added.
43137 experimental spectra added.
Clustering 1031219 spectra...
Building SpecTrees...
c'est extractor
Running SpecXtract and SpecShift...
[          ]**********]
Done.


Dataset analyzed in 6315 seconds.
