Package: i2masschroq-doc Source: i2masschroq Version: 0.6.3-1~bullseye1 Architecture: all Maintainer: The Debichem Group Installed-Size: 36810 Depends: libjs-jquery, libjs-highlight.js Breaks: xtpcpp-doc (<< 0.4.54) Replaces: xtpcpp-doc (<< 0.4.54) Provides: xtpcpp-doc (= 0.4.54) Homepage: http://pappso.inra.fr/bioinfo Priority: optional Section: doc Filename: pool/main/i/i2masschroq/i2masschroq-doc_0.6.3-1~bullseye1_all.deb Size: 34225996 SHA256: 1c3c96721b5877a341ad37e13a2ad1d06d6dcbb6af5f3d100fa1b19a16ca2925 SHA1: 58ef616a688add05257cfb859a5bf34acaf65147 MD5sum: 2fec86b4761d43b5a089dc26cbec4909 Description: Successor of X!TandemPipeline (user manual) The program allows one to perform the following tasks: -Reads X!Tandem xml results files -Reads MASCOT dat results files -Reads TPP pepXML results files -Reads PSI mzIdentML results files -Run X!Tandem analyzes through a graphical user interface -Implements various filters based on statistical values -Powerful original grouping algorithm to filter redundancy -Phosphopeptide mode to handle phosphoproteomics datasets -Edit, search and sort the data graphically -XIC chromatogram browser (eXtracted Ion Current) -Comparisons of theoretical isotope patterns to measured MS1 XIC areas -Export data directly to Microsoft Office 2010 and LibreOffice (ods export) -Handle huge datasets very quickly -Perform peptide quantification through MassChroQml export . This package ships the user manual in both PDF and HTML formats. Package: libodsstream-doc Source: libodsstream Version: 0.9.2-1~bullseye+1 Architecture: all Maintainer: The Debichem Group Installed-Size: 1504 Multi-Arch: foreign Homepage: http://pappso.inrae.fr/bioinfo Priority: optional Section: doc Filename: pool/main/libo/libodsstream/libodsstream-doc_0.9.2-1~bullseye+1_all.deb Size: 138660 SHA256: 35330509cab643352aad7266764645016acb0e8a0d631c296646bc2ca3d7c855 SHA1: e7c1636c02407f61b7938b3dc0653248b8d80267 MD5sum: 88f38f45deef0320b04c70d9e4a06bdc Description: doxygen documentation of the ODSstream library libodsstream provides a simple way to read and write Open Document Spreadsheet files. The hight memory efficiency comes from the fact that only streams are used for the read/write operations. . This package contains the developer documentation. Package: libpappsomspp-doc Source: libpappsomspp Version: 0.9.10-1~bullseye+1 Architecture: all Maintainer: The Debichem Group Installed-Size: 51604 Homepage: http://pappso.inrae.fr/bioinfo Priority: optional Section: doc Filename: pool/main/libp/libpappsomspp/libpappsomspp-doc_0.9.10-1~bullseye+1_all.deb Size: 10365032 SHA256: 9b6e7736148441f17417cffa856d5f3574a6092d50fdaa1744018f78e00d3e91 SHA1: 3206edf9b02a5ff2c73d94c87e8e0a3b487c4e87 MD5sum: 131de3e5beb079e9d61129ddbd8b2dea Description: C++ library to handle mass spectrometry data (developer documentation) libpappsomspp provides a simple API to perform a variety of tasks related to mass spectrometry. Although the library is proteomics oriented, it also features interesting functions to perform mass spectral data integrations. The main features are: . - abstractions for peptides, ions, amino acid modifications... - integrations to mass spectra, drift spectra, XIC chromatograms... . This package contains the developer documentation. Package: libquazip1-qt6-doc Source: libquazip1-qt6 Version: 1.3-2.1~bullseye1 Architecture: all Maintainer: Ben Westover Installed-Size: 1419 Homepage: https://github.com/stachenov/quazip Priority: optional Section: doc Filename: pool/main/libq/libquazip1-qt6/libquazip1-qt6-doc_1.3-2.1~bullseye1_all.deb Size: 216200 SHA256: 57a317be12d48b443d0f1b81a3428c9c5a0e804a262d8f7a5e87937110517ea4 SHA1: 49d60503bf78c51fac794d3806590dcbadec6d1c MD5sum: dfe759350b302c3a5ffea876a6dc25cb Description: Qt/C++ wrapper over minizip - Version 1 (Qt6) - documentation QuaZip is the C++ wrapper for Gilles Vollant's ZIP/UNZIP package (AKA Minizip) using Trolltech's Qt library. This package contains documentation for version 1 of the library, compiled for use with Qt version 6. Package: masschroq-doc Source: masschroq Version: 2.4.20-1~bullseye+1 Architecture: all Maintainer: The Debichem Group Installed-Size: 7285 Depends: libjs-jquery, libjs-highlight.js Suggests: masschroq-cli, masschroq-gui Homepage: http://pappso.inra.fr/bioinfo/masschroq/ Priority: optional Section: doc Filename: pool/main/m/masschroq/masschroq-doc_2.4.20-1~bullseye+1_all.deb Size: 6933744 SHA256: 7478022cc77fa6da45a6dd0731dca8f5d660ac78735c2a2bc3c17c26de4a7d9f SHA1: 4e69a66b6cf99936ea81fa6bb371ffe187bd0523 MD5sum: 95aa83143782a634655c017917140174 Description: Mass Chromatogram Quantification (user manual) The MassChroQ software performs quantifications of data obtained by LC-MS (liquid chromatography - mass spectrometry) experiments. . In particular it can be used to perform: - retention-time alignment of runs - XIC extraction and filtering - peak detection and quantification. . This package ships the user manual in both PDF and HTML formats. Package: ms-eater Version: 0.3.8-1 Architecture: all Maintainer: Olivier Langella Installed-Size: 102 Depends: python3-matplotlib, python3-qtpy, python3-pymzml Multi-Arch: foreign Homepage: http://pappso.inra.fr/bioinfo Priority: optional Section: libs Filename: pool/main/m/ms-eater/ms-eater_0.3.8-1_all.deb Size: 17744 SHA256: 66ef5487dcb077de66f426bfa87aac62263d768d741e4e8518e4f5c1421d6445 SHA1: 330a4914b88508935b0fa0d8cb4de31e3dba1a45 MD5sum: b839c52ea22b38a3091c258dbcacc260 Description: set of proteomic tools used on PAPPSO. computes peptide mass, isotope ratio, fragmentation products, protein grouper. Package: xtpcpp-doc Source: i2masschroq Version: 0.6.3-1~bullseye1 Architecture: all Maintainer: The Debichem Group Installed-Size: 30 Depends: i2masschroq-doc, debconf, po-debconf Homepage: http://pappso.inra.fr/bioinfo Priority: optional Section: oldlibs Filename: pool/main/i/i2masschroq/xtpcpp-doc_0.6.3-1~bullseye1_all.deb Size: 16756 SHA256: 5bf8d79a4358d6d7e5b11dceebc9ae97e01323c739beb34852deb403e6755e43 SHA1: a5386d0c88f5bcc27ab38f53f47114f1e1b70534 MD5sum: 427051c55303e2a34302e9cdac5d84d8 Description: Transitional package from xtpcpp-doc to i2masschroq-doc The program allows one to perform the following tasks: -Reads X!Tandem xml results files -Reads MASCOT dat results files -Reads TPP pepXML results files -Reads PSI mzIdentML results files -Run X!Tandem analyzes through a graphical user interface -Implements various filters based on statistical values -Powerful original grouping algorithm to filter redundancy -Phosphopeptide mode to handle phosphoproteomics datasets -Edit, search and sort the data graphically -XIC chromatogram browser (eXtracted Ion Current) -Comparisons of theoretical isotope patterns to measured MS1 XIC areas -Export data directly to Microsoft Office 2010 and LibreOffice (ods export) -Handle huge datasets very quickly -Perform peptide quantification through MassChroQml export . This package is a transitional package. You can remove it at any time.